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Oxford Nanopore
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Oxford Nanopore
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Image Search Results
Journal: bioRxiv
Article Title: Genome Detective Coronavirus Typing Tool for rapid identification and characterization of novel coronavirus genomes
doi: 10.1101/2020.01.31.928796
Figure Lengend Snippet: Genome Detective Coronavirus Typing Tool assembles genomes from next generation sequencing (NGS) in FASTAQ format or assembled genomes in FASTA format. A user can submit up to 1Gb of NGS data or 2,000 assembled genomic sequences. For each assembled genomic sequence, the tool identifies the virus species, constructs a phylogenetic tree and identifies phylogenetic clusters, which includes the novel coronavirus identified in Wuhan China in 2019 (2019-nCoV). The tool identifies changes at nucleotides, coding regions and proteins using a novel dynamic aligner and display all of the mutations in detailed tables and reports.
Article Snippet: It accepts assembled genomes in FASTA format or
Techniques: Next-Generation Sequencing, Genomic Sequencing, Sequencing, Virus, Construct